rs219713934 SNP Detail

Summary

• ID
  rs219713934
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:71763386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACAAAAAA AAAAAACCTT AGATGATGTG ATATATACAC
  CCCTCTTTAT TTCTCCAACC TTATTCTGTC TAATACAATA GCCACCTGCT ACATAGGTCT
  A
  TTTCAATATA CATTAATTGA AATTAAGAGG CTCTGGAGTT GAGTTCCTTA GTTGGCCTTG
  AGTTCCTTGA TTGACTGGCA TCACAGAGGG GAATTCTAA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321818365	CHEV_6_71736396	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219713934					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71763386 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Reep1	receptor accessory protein 1			Intron
				Noncoding-Transcript-Variant
Rr632005	regulatory region 632005			399 bp proximal
Rr632006	regulatory region 632006			1786 bp proximal