rs219585224 SNP Detail

Summary

• ID
  rs219585224
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38829060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTATCCCT TCAAACAGAG
  CCCACACAAC TCTGTTCCCC TTTTAAGATA CTTCTGATAG GAATTTTGTC ACAGAAACAA
  GAAATCTTGC CCATACAAAG CTGAAGTCTA AGACAAAATA CTCAATGATT GTCTCAGCTC
  TTCATGGTCG TATCCATGAA CTGTTTATGA TTTTTATGGA AAAAAATCAA GACTGTGTTA
  Y
  AGGACATTTA ACCTTGGAGT GATATAGATA CACTTATATG CGTTTGATTT CATTTTCACC
  GGGGAAAAAT GTAGCCTTGG GAAAACCTTG TCAGGAAGAA GCATCACTAG AGAGCGAGCA
  TGACTTCAGA CCCTCAAAGA ACAGCACAAA TAACAAAATT ACCTCACTTC TACTGTGACA
  CCATCCACCC AAAGCCCTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320722856	CHEV_3_38673833	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219585224					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38829060 () rs orientation: forward

Symbol	Name	Function Class
Rr575702	regulatory region 575702	1935 bp proximal