rs219448450 SNP Detail

Summary

• ID
  rs219448450
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134948751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACCTACTC CCGGCCAACT TGTACCTGTT
  ACCAAAAGAT AGACCGATCC ATTTATTGAT CTATCGATTG ATTGATCTAT CCGTCTTCTG
  TCACCTATCC CCTCTCCCTC TCCCTCCTCc tctgtctctg tctctgtctc tgtctctttc
  W
  cACAGTTCCC TTTAGTTTAT TCACTAAAGC CTATTGGTTT ACGGTGTACT TCAATCTAAG
  CACTGGCCCT GACCCATGTT CAGGTGGCTA ATTTGTATCT AGACACCTAA GCCCAGAGGG
  TCTTTAAAAT ATTCAGCTAC ATTGGATTTT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321351256	CHEV_4_134777355	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219448450					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134948751 () rs orientation: forward

Symbol	Name	Function Class
Clic4	chloride intracellular channel 4	Intron
Rr601951	regulatory region 601951	1485 bp distal
Rr601952	regulatory region 601952	1603 bp distal
Rr601953	regulatory region 601953	159 bp proximal