rs219321525 SNP Detail

Summary

• ID
  rs219321525
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141458538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCCTGTT TCTGTTTTTG
  CTTTGTTTTC TGTTGTTTCT TGTTTTTCAA GACAGGGTAT CTCTGTGTAG CCCTTGCTGT
  CCTGGAACTA TGTAGACCAG GCTGGCCTCA AGCTCACAGA GACCCACCTG TCTCTGCCTC
  CCCAGTGCTG GGATTAAAAG TGAGCACCAA CAGGTCTGGT GAACTCAGAT TGTAATATAG
  A
  TTCTGGGCAT CCAACTTCTT CAGTGGGCTT CCACATCTAG GTACTTCATC CACTGGACCA
  TCACCCTGGC ACATGCTGGT TGGCTTTAAA ATGCCTGGAT TGTAAATTCT TTTCCTTTTG
  AGCCCAGGTC TCTCACTATC TTGAGGCCCT GGCTATCTAA ACCAGGCTAG CCTCCTCCTC
  ACGAAGGTCT CCCTTCTTCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389344	CHEV_4_141287142	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219321525					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141458538 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	1676 bp distal
Rr603868	regulatory region 603868	1410 bp distal
Rr603869	regulatory region 603869	525 bp proximal