rs219286851 SNP Detail

Summary

• ID
  rs219286851
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:47437674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAGAGGTT AACAGTAAAG
  AGAAGTGAAA ATAGAGATGA AGGAGATTAG AGAGGTCTGA AATGAGAGAG ATACTCTGAA
  TGAGAAATAT TTAGAGGAAG AACCAGTAAA TAAGAGTCAG ACAAGAAAAA GAGTTAAGAA
  AACATGAGGC TGACAAAGAC AGAGACCAGA GTCAGAATCA GAGCTGTGCT GTGAGACAAA
  K
  AGATAAGAAA AATGAAATGT TGGCCACAAA AGTCAGGAAA ATTAGAAAAC TTAGATAGTA
  CCTGGCAACA AAAAAAAAGC TTTTGGCTAA AGATCAATGT GTTTAAGAGA TAACAAAAGG
  GGTGCTAATA CAGAAGCTGA GTCCTTAGAA GAGTCCGGTG GCCTACCTGT TGAAGCAGCT
  AGAAAAAGAG ACTGTGTTTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	JF1/MsJ	LP/J	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SEA/GnJ	ST/bJ
ss357828728	MGP_WTSI_3_47287161	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	JF1/MsJ	LP/J	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SEA/GnJ	ST/bJ
rs219286851					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss357828728	MGP_WTSI_3_47287161	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:47437674 () rs orientation: forward

Symbol	Name	Function Class
Rr576073	regulatory region 576073	469 bp proximal