rs219280442 SNP Detail

Summary

• ID
  rs219280442
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152448402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCAGGACA GTGCCACTGA
  CACACACAGC AGGACAGTGC CACTGACACA CACAGCAGGA CAGTCCCACG GACACACACA
  GTAGGACAGT TCCACGGACA CACACAGCAG AACAGTGCCA CTGACACACA CAGCAGGACA
  GTCCTACGGA CACACACAGC AGGACAGTGC CCCAGACACA CAGTAGGACG ATCCCACAGA
  C
  ACACAGTAGG ACGATGCCAC AGACACACAC ATGAAGGGAA ACACACTGAG TTGTGTGTAA
  GCTTACACAA AGTGGGATCT CGGCTGGGTC CCGGTTAGGG ACTGAGGTCA GCAGGATGAT
  TCTGGGAGCC AAGCAGGTCC AAGAAAGGAT TAGTGTTAGT GAGCTGTCAC AGTCCCAAGA
  GACACACACA CAAGAATATA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434330	CHEV_4_151738054	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219280442					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152448402 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Intron
Rr605861	regulatory region 605861	1335 bp proximal