rs219230174 SNP Detail

Summary

• ID
  rs219230174
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19372708 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTGTTTAT ATCCATTCCA GCATCTTATT
  CTTAGCTCAA AAAATTAAAA CCATTCAAAC TGATGAATAA AAAAGAAATA CCTCTTTTAA
  AATTTCAAAA TAATTTTATT TCTAGGGAAA CAACTTAAAT ATAAACATTT TATAAGACCA
  Y
  GAAATAAATT ATATGTTAGC AGAATAAAAT TTATTTTTAA CTGTTGAAAC TTACATTAAA
  ATTGATCTTA ATCACAAGGA TAAGAATTTG GTTAAATGCA ATTAAAACAA CTCTTACAAA
  ATTTAGAAAT CAACTAATGC AAGAATTACT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320678411	CHEV_3_19218544	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219230174					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19372708 () rs orientation: forward

Symbol	Name	Function Class
Gm66414	predicted gene, 66414	1734 bp downstream
Rr573974	regulatory region 573974	418 bp proximal