rs219185007 SNP Detail

Summary

• ID
  rs219185007
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:89230334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGG GCAGTTCTTA TTACAAAACA
  G
  GTTCAGAGTG CTTATGAAGG AGGTC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321204819	CHEV_4_88958006	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219185007					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:89230334 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2b	cyclin dependent kinase inhibitor 2B	1058 bp upstream
Cpgi14441	CpG island 14441	832 bp distal
Gm12610	predicted gene 12610	within coordinates
Rr398336	regulatory region 398336	844 bp downstream
Rr595183	regulatory region 595183	1450 bp distal
Rr595184	regulatory region 595184	924 bp distal
Rr595185	regulatory region 595185	660 bp distal
Rr595186	regulatory region 595186	832 bp distal
Rr595187	regulatory region 595187	1374 bp proximal
Tssr42412	transcription start site region 42412	1082 bp upstream
Tssr42413	transcription start site region 42413	1072 bp upstream