rs219174171 SNP Detail

Summary

• ID
  rs219174171
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113698614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATCTTAAC GACCTGCCCG
  TAGCTATGGA AGAGGAGCTG GGAAATGTAC CTTCATCCTG TCAATAGGAG CTGAGAGAGA
  TTACATGGCT CTAGAAAGGA CAACACCCCA TTCTTAATAA AGCCAAGACC AAAACAGGTG
  GATGAAATTT CAATGTATGT ATTATTAGGG TTCTCTAGAG AAACAAAACC GACATAATGA
  G
  CATACGTATA TTAAGGGGAA TTTAGTAGAG TGATTTATAG GCCAACGATG GGTGTCTCCT
  GACAAAAGGG CCAAGAATCC ATTAGTTGCT CAGTCATGAT GTGGGATGTC AGATGGTCTT
  TTGTCAACAT TTGAATCCAG AAGCAGGTTT AACACCAGTG AGCCATGCTT TAGCCAAGGG
  ATAGATGAAC TGGACAGTGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911661	CHEV_6_113671647	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219174171					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113698614 () rs orientation: forward

Symbol	Name	Function Class
Ghrl	ghrelin	1773 bp upstream
Rr636588	regulatory region 636588	208 bp distal
Tssr62471	transcription start site region 62471	1770 bp upstream