rs219172170 SNP Detail

Summary

• ID
  rs219172170
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144635578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTT GCTGTCTGTG GTGGTTACTG
  K
  TATTTGTAGA AAGAAGCAAA GGCCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321410749	CHEV_4_144498911	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219172170					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144635578 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dhrs3	dehydrogenase/reductase 3			Intron
				Noncoding-Transcript-Variant
Rr604256	regulatory region 604256			1847 bp distal
Rr604257	regulatory region 604257			1454 bp distal
Rr604258	regulatory region 604258			within coordinates
Tssr40175	transcription start site region 40175			1893 bp downstream