rs219157127 SNP Detail

Summary

• ID
  rs219157127
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113699299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAACTCTTA CAGTGTTTAA
  GTCCAGTGGG CAGGCTCTAA GTCGTGTCCA GGCTTCTAGG CTTCTGTGCC TGCAGTGCTG
  TCGAAGGATC CTGCTGGCAT TCTGCCCTCT CCTTTCAAAG CCTAGCATAT CCCACTGGCT
  TTCCTGCCCT TCTCCCATCT TAGAACTGTA GCCCCAGCCC TTGTCTTTAT TGTCTATTCA
  A
  CAGTGTTTGC CCTCAGCCTA ACGGTGACCC AGAGCCTGAC ACATTGTGCT CAGATCCCAC
  CTTGCCGTCC TCACAAATCT GGTCCTTTCC CTTTCCAGGT CTCTAGTGCT CGCTGGGCAC
  TGGTAAGTAT TCTGAGTGGC TGGTTATCTA GCACCAGGGT CTCAGTGCTA GTTAGGCCTG
  CAGGGCCCTG GCCTCAAATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911667	CHEV_6_113672332	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219157127					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113699299 () rs orientation: forward

Symbol	Name	Function Class
Rr636588	regulatory region 636588	893 bp distal