rs219154229 SNP Detail

Summary

• ID
  rs219154229
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18393673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTCATTGTC TCAATAGTCT GATAGATGAA
  TGGGAAGATA CACGCCCCAT GTAAGATCCT ATGCTCCTGC CAGAGCAGTT ACAATTCAAT
  GGGTGTGTTC AGTTGAGTAA GATCCCCAGA GGGGAAAGAG AGTTAAGGAT TGTGTTTTAT
  M
  TTGTTTGAAC TACACCTTAA TTGTGAAATT GCTCAATAGA TCTGGGCACT TGAGATCAGA
  AACCCCTAAG AGGATATCCT TCTCTTTCTG TTCCATGGTT AAGCCATAAT GTAAACAGTT
  TCATCCTTTA AACCCTGGCT GCTCTCTGCA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320675036	CHEV_3_18239509	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219154229					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18393673 () rs orientation: forward

Symbol	Name	Function Class
Gm65503	predicted gene, 65503	within coordinates
Rr374602	regulatory region 374602	within coordinates
Rr573896	regulatory region 573896	within coordinates