rs218917218 SNP Detail

Summary

• ID
  rs218917218
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36915354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGT GCTGCTTACT GGATTGCTTC
  T
  CGTGGCGTGT TCAGCCTGCT TTCTT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320705819	CHEV_3_36760127	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218917218					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36915354 () rs orientation: forward

Symbol	Name	Function Class
Bltp1	bridge-like lipid transfer protein family member 1	1899 bp upstream
Cpgi13092	CpG island 13092	1578 bp proximal
Rr374830	regulatory region 374830	1992 bp downstream
Rr575409	regulatory region 575409	288 bp proximal
Rr575410	regulatory region 575410	1411 bp proximal
Rr575411	regulatory region 575411	1912 bp proximal
Tssr28876	transcription start site region 28876	790 bp upstream
Tssr28877	transcription start site region 28877	809 bp upstream
Tssr28878	transcription start site region 28878	1897 bp upstream
Tssr28879	transcription start site region 28879	1943 bp upstream
Tssr28880	transcription start site region 28880	1961 bp upstream
Tssr28881	transcription start site region 28881	1974 bp upstream