rs218830302 SNP Detail

Summary

• ID
  rs218830302
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132615020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAACAGCC AGGGCCACAC
  AAAGAAACTA TGACTTGAAA ACCCCAAAAC CAGGCTGGAG AGAAATGGCT CAGGGGTTAA
  GAGCACTGAC TGCTTTTCCA GAGGTCCTGA GTTCAATTCC CAGCAACCAC ATGGTGGCTC
  TTTCATGGGA TCCAATGCCC TCTGCTGGTG TGCCTGAAAC AGCTACAGTG TACTCATATA
  Y
  ATTAAATAAG TAAATAAATA AAGTGTTGGG CTGGAGAGAT AGCTCAGTGG TTAAGAGCAC
  GGACTGCTCT TCCAAAGGTC CTGAGTTCAA ATTCCAGCAA CCACATGGTG GCTCACAACT
  ATCTGTAATG AGATCTGATG CCCTCTTCTG GTGTGTCTGA AGTCAGCTAC AGTGTACTTA
  CATATAATAA ATAAATAAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337150	CHEV_4_132443624	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218830302					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132615020 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	1293 bp downstream
Gm70413	predicted gene, 70413	1493 bp downstream
Rr601104	regulatory region 601104	28 bp distal
Rr601105	regulatory region 601105	135 bp proximal
Rr601106	regulatory region 601106	245 bp proximal