rs218814270 SNP Detail

Summary

• ID
  rs218814270
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:45987455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGC TAAACTTATA CAAATAAATT
  W
  ACTAAATACA AGAAAAAGCA GGGCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325403767	CHEV_17_45813478	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218814270					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:45987455 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr527489	regulatory region 527489			1012 bp proximal
Rr527490	regulatory region 527490			1518 bp proximal
Rr527491	regulatory region 527491			1750 bp proximal
Rr527492	regulatory region 527492			1950 bp proximal
Tmem63b	transmembrane protein 63b			Intron
				Noncoding-Transcript-Variant