rs218746285 SNP Detail

Summary

• ID
  rs218746285
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13152542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCTATGCT TTTATCAAAG TGGTTGCCTA
  GTTCCTAAGA TGAACTGAGG CTCTAGCACC ATCTGCAGGA CAAGTCTGAT AATTTCATCT
  CAGTGTAGAA ACTACAGGAG ATTACTATAG ATTTAAACTG AAGAATGACA GGTAGtctct
  Y
  tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc tccctccctc
  cctctctctc tgcctctctc tctctctctc tctctctctt tctctctctc tctctctcct
  ctctctttcA Ccacacacac acacacacac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747182	CHEV_6_13102543	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218746285					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13152542 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	within coordinates
Rr626557	regulatory region 626557	77 bp distal