rs218683480 SNP Detail

Summary

• ID
  rs218683480
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:58489339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAACAACAG CTACtgtact aattttttct
  cttattgctg tgaggacata tctagcaaaa agtaagttaa ggccaggagg ggtttatttt
  tgtctctcgg tttaaggatc tggtacactc tactgggggg cggggtcctg ccagcagagc
  R
  tgaagctcct ggtcaaccga acacgcccag gaagctggga tgaagaatgc tgtgccccac
  tggcttttcc caggactcca gcctacagaa tgctgccccc cacagttagg gtcgtcttcc
  caccttacca actgtatcta caaattccct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138264	CHEV_4_58502211	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218683480					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58489339 () rs orientation: forward

Symbol	Name	Function Class
Lpar1	lysophosphatidic acid receptor 1	Intron
Rr592898	regulatory region 592898	1117 bp proximal