rs218618054 SNP Detail

Summary

• ID
  rs218618054
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:86785820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCATTAAA TCCAGTTTTC TCACTGAGAA GACTCCAGTT
  AGCTCCCTCA CACACACACA CACACACACA CACACACACA CACACACACA CACACACACA
  S
  ACACACACAC ACACACCCGA GAGGGATGAG ATCTAATGGA GTTTACACAT TTCTTAGACT
  GCTTGTCACT TAGTAGGAAG CCAGGCTGCC AGAGTATGC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321847376	CHEV_6_86758832	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218618054					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86785820 () rs orientation: forward

Symbol	Name	Function Class
D6Dcr21	DNA Segment, Chr 6, Derry C. Roopenian 21	1912 bp distal
D6Mit29	DNA segment, Chr 6, Massachusetts Institute of Technology 29	1911 bp distal
Rr633520	regulatory region 633520	1915 bp distal
Rr633522	regulatory region 633522	576 bp distal
Rr633523	regulatory region 633523	974 bp proximal