rs218594056 SNP Detail

Summary

• ID
  rs218594056
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:131859101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTTATGG AGGTGGCTGA TGACATCCAT
  GGCTGAATCT CTGTCTGACC TGGAATTCAG TAGCTGACCT AGGCCCAGCC TTAGCTCCGG
  TCTCAGGATG GCTCTGGCCA GCATGATGTC AGGCATGGTC ACAGAAGGAG GTAATCACAG
  Y
  CATACTGGGG ACTTTGTGGG TAAGGGACCA GTAGAAATGT CTCCAAGCAA ACCTTTCCTG
  GCTGGAGCCT GGAGACTTGC GAGGATACAC AGCTTCGTGA TCTGAAAGCT GCGCACACTG
  TTGTCTGCCT GCTCTGGGTG TGTGGGCACA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330907	CHEV_4_131687705	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218594056					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131859101 () rs orientation: forward

Symbol	Name	Function Class
Oprd1	opioid receptor, delta 1	Intron
Rr377201	regulatory region 377201	1863 bp downstream
Rr600880	regulatory region 600880	1992 bp distal
Rr600881	regulatory region 600881	537 bp proximal