rs218525423 SNP Detail

Summary

• ID
  rs218525423
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105173606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGCACAG GCCCTCAACC
  ACGGAGCCAC CTGCCTCTCC AGCTCCATGC TTTTTCCATG CTTTTTGTGT CCCAGTCGCA
  TGTAGCCTAG GCTGGCTTTG AATTCACCAT ATGCCTAAGG CTAGCCTTAG GCTTCCAGCC
  TTACCTCCAA GTGCTGGAAT TGCGGGTGTG CACCACCACA TTGGGCTTTT AGGTTATTTT
  K
  AAGAGCACAA AATTTCATTC CAAATATAGT TTTGGTTATT TACAGCTTGT GCTTAGACAA
  ATTACCTTTT CTGTGCTCCA CTTCCTTCAC TTGTTAAACA GAGATTATTT TACTCAAGCT
  CTTGAGACAG GTTATGAAGA CCAAATGGAG ATTCATGTCT ATGAAGTGTT GAGAACAGCT
  GCTGGCCTCT TGCAAGCCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243585	CHEV_4_104989014	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218525423					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105173606 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596595	regulatory region 596595	971 bp distal
Rr596596	regulatory region 596596	176 bp proximal
Rr596597	regulatory region 596597	650 bp proximal