rs218379888 SNP Detail

Summary

• ID
  rs218379888
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:99036113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAGCCCA GTTCTGCGCT
  CAGCTATGGA AGCACTTGAT GCGAGCTTCA AGCAATTCAG CTTTTATAAC CAAGTCACCC
  AAGGGACTGG CTTCTGCTTT GTCGAGCTCC GCCGGTTGAC AGAGCTGTGT ATTCTTCAGT
  GTCCTAGACC ACAGAAAACA AAGAAGGACT GTGCTGCCCT CCCACCAGGG ACTCATCTAT
  R
  TATTCCAGAT ATTTTGGCCT CTCCTCCCAC TTCCTGCTCT CTGCATGCGC CTTCTTTCTC
  TCCCCCCTTC TCTTTTCTGT TTCCTTCTCC ACTATGACTT CCTGGGCCTT GGTCCTTGGG
  ACCAGTGAAC TCACCCACCA AGGATTTGTT GTTTTTCCAA CAAACCTGTG TACATATACT
  CTAATCTGGT TTGAATTGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222915	CHEV_4_98814567	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218379888					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:99036113 () rs orientation: forward

Symbol	Name	Function Class
Gm12681	predicted gene 12681	within coordinates
Rr595831	regulatory region 595831	972 bp distal
Rr595832	regulatory region 595832	358 bp proximal