rs218326244 SNP Detail

Summary

• ID
  rs218326244
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141449139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTTGACC CCACAGTTGA
  GACCTTGTCT CAAAAACAAC AACAACAACA AAAAACCCAA CAACAACAAC AAAAAAAACC
  AAAGCAAACA AACAAAAACC AAAAGCAGCT GGTTGTGATG GCTCAGGCCT TAACTCCAAA
  CATTTGGGAG GCAAAGTCAA CAGGGATCTC TGAGTGTAGA TGGGAGCCAG TGTTTTATAT
  G
  GTGAGACCTG CCTTAAAAAC AAAACAAACA ACAACCAGCA ATTAATCAAT CCTCTAAAAA
  GTCAAATCTC CCCCAGCCCC CCAAACTCCC TGGTCCTAGC TTGCCCCTGC TACCTGTATG
  AGGAGGCTGA CCAACAGGAA TGGGGTCCTA GGTTTTTGTG GGTTAATTTT TCTGTGGAAA
  TTGGGGGAAC TGTTTATTCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389278	CHEV_4_141277743	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218326244					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141449139 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15241	CpG island 15241	904 bp proximal
Ddi2	DNA-damage inducible protein 2	Intron
Rr603862	regulatory region 603862	1713 bp distal
Rr603863	regulatory region 603863	423 bp distal
Rr603864	regulatory region 603864	93 bp proximal
Rr603865	regulatory region 603865	1581 bp proximal
Tssr1364	transcription start site region 1364	1611 bp downstream
Tssr44360	transcription start site region 44360	1469 bp downstream
Tssr44361	transcription start site region 44361	1573 bp downstream
Tssr44362	transcription start site region 44362	1630 bp downstream