rs218212840 SNP Detail

Summary

• ID
  rs218212840
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9666117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCCAGTTA TTCAATACAG
  AAAGTCTTGG TGGACTTGCA GCCATCTTGT GTGTCCAGGC TCCTCTTGAA TGTATTAAAT
  CAGTGGATTG TCAATCTTTC TAGGTTGCTA GGTTCTGCTT GGTTAAACTT CTACACAGCA
  TTAAAAAGAA AGCACCACCC TGGGCCTTGT TACCTAAGCT CCCAGCTGTT CTGTCTTTGC
  Y
  AAAAATGGAG ATATTAGTAA AGCCTTCTCT GTTTGGCACT GCCCTTTTAC TGCTTGTTAG
  TAAAACACTA GTTGAAGACT TGCTCACTGT GTCACTTAGT AGTTTTTCAG ACTCTCAGGA
  GCACTGCTAG GGTTCCATAT ATACAAGGGC ATCTGACCAA TGGGAAATTG AAAACACTGT
  GTAATACATA CAAAGTTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320651644	CHEV_3_9601057	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218212840					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9666117 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573455	regulatory region 573455	849 bp distal
Rr573456	regulatory region 573456	105 bp distal
Zfp704	zinc finger protein 704	Intron