rs218187778 SNP Detail

Summary

• ID
  rs218187778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36853169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCTCTGA GAACCAGACA
  GTTCCCATCC AGGACTGCTC CAGAGGGTAG ACAAATGTCA ACAGCCACAC AGTTCATTTT
  ATGAAACATT ACTGACAAAA ACAGTTCTCA GAGAAATAAA AAGCAAATAT TGTTGATGAA
  TACAGATACA AAATATGTAA TATGTTAGTA TCAATTTATG AAGTATTAAA AATAAGATTA
  R
  TGCTGTTTAA AAACTTAACA GGAGGGGTTT TCACTGGGAC CCCCTAGAGA TCTCGGAGCC
  TGTAGACCTC TATCAGGAGA GACTGTGAGT CTTTAGGTTC ACTCAAAAGG AGCACACAAA
  TGGTCTATTA AACTCAAACC CACTTATTAA ATAAACTCTT ACACAGGCAG AAACTACCTT
  TAACTTGGCA AAGCTCACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320705355	CHEV_3_36697942	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218187778					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36853169 () rs orientation: forward

Symbol	Name	Function Class
Rr575399	regulatory region 575399	1564 bp distal
Rr575400	regulatory region 575400	325 bp distal