rs218180162 SNP Detail

Summary

• ID
  rs218180162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109767059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagttcaaa ttccagcaac cacatggtgg
  cttacaacca tccgtaacga gatctgacgc cctcttccgg agtgtctgaa gacagctaca
  gtgtacttac atataataaa ttaaaaaaaa aaaaaaGATG CTGCAAGCAT Ttgtgtgtgt
  R
  tgtatgcacg ggattgtaag agcattgaag ttaaggtccc tctacattat atttattcat
  tcatttaaac acaaattctc ctactgaatc tggagcttgc agttttggct atcctggctg
  gccagggagt ccccgggacc cacccctctc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322394803	CHEV_7_117311366	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218180162					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109767059 () rs orientation: forward

Symbol	Name	Function Class
Gm72506	predicted gene, 72506	12 bp downstream
Rr1426	regulatory region 1426	1331 bp downstream
Rr653207	regulatory region 653207	1370 bp distal
Rr653208	regulatory region 653208	1149 bp distal
Tssr2368	transcription start site region 2368	1593 bp upstream
Tssr74254	transcription start site region 74254	1489 bp upstream