rs218126263 SNP Detail

Summary

• ID
  rs218126263
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:137820403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATAGTGCG TAGGGACGCA
  CTCGAATAGC AGCAGAAATT GTTGTAGGAT AGTGGGATAA AATGATGAGG TGTCCTATAA
  AATGCGCTGT CCTCTTTTAA AATGGCCTGA GCATCTGGTA AGCATGGAAT ACATTTAGAT
  TCACACAAGC TGGAAAATGG TAAACAGCCC CTTAGCCCAC CCCAAATAGC CACTGTTACT
  Y
  TTTCTTTGTG TAGCCACATA CTTTTTGCAA TTTGATGCAT TTAAGGACTC TCATAACATG
  GGTAACAGTG CCCAGCATGG TGGCTCCCAC TCCTAATCTC AGCACTCATG GGGCTGAAGC
  AGAAGAATTG AAACAGGTCT GAGGCTACTC TGGTCTACCC TGGAACTCTA ACAGCTATAT
  AACAAGAAAG CAGGGCATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320522699	CHEV_2_137804219	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218126263					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:137820403 () rs orientation: forward

Symbol	Name	Function Class
Rr565959	regulatory region 565959	377 bp distal
Rr565960	regulatory region 565960	459 bp distal