rs218037533 SNP Detail

Summary

• ID
  rs218037533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132244329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTGGGGT GGGGGGATAT
  ATGAGACCTT GACTGACTGC TTGTCCTGTG CACAAGCTGG AGTGCTTAGA TTATACCCCT
  GTGCTATCAT TCTGGGCTCT TCAACTTTTA ATCCTTTACA AAAAATCAGT AGTTTATTTC
  TTTTCCGTTT ATGTGCCTGT GTGTGACCCG ATGAGCACAA GGTGCCCTCA GAGGCCTCTG
  Y
  TACACGAGAC CTTGTCTTTT TTTTTTTTTA AAGATTTGTT TATTGGGGGC TGGAGAGATG
  GCTCAGCGGT TAAGAGCACT GACTGCTCTT CCAAAGGTCC TGAGTTCAAA TCCCAGCAAC
  CACATGGTGG CTCACAACCA TCCGTAATGA GATCTGATGC CCTCTTCTGG AGTGTCTGAG
  GACAGCTACA GTATATTTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333981	CHEV_4_132072933	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218037533					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132244329 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
n-TAagc8	nuclear encoded tRNA alanine 8 (anticodon AGC)	939 bp downstream
Rr377207	regulatory region 377207	703 bp downstream
Rr600996	regulatory region 600996	1728 bp distal
Rr600998	regulatory region 600998	990 bp distal
Rr600999	regulatory region 600999	756 bp proximal
Tssr39372	transcription start site region 39372	1190 bp downstream
Tssr43681	transcription start site region 43681	1584 bp upstream