rs217992889 SNP Detail

Summary

• ID
  rs217992889
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138132933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTACATAG CAAGATCTCA
  AAGAAAAAAA TATTAGATTT TTTTTTTTTA CGTCTTGGGG TTCATGCTTA CAGGGTCTCA
  TTATTATTCG TCTTGGGACT GTACATGTGC TCTGAAACTC AGGCATTGTG GCTGACACCT
  GTAATCTCAG GCACTGGGGA AAGCAGAGGC AGGGGGATCA CTATAAATTC AAGACCAATT
  K
  GGTCTACAGA GCAAGTTCCA GGCTAAGCCA AAAGAGATCT TTTTTTTTTT AAAGATGTAT
  TTATTTATTA TATGTAAGTA TACTGTAGCT GTCTTCAGAG ACTTTTTTTT CTTCTTGCTC
  TGGCCTCAAA ATCTTTTCAC AGAACAAAAC AACCCACATC ACATCCAGCA TCCAGGCAGG
  GGTTTGTAGC TCAGTTGGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373191	CHEV_4_137961537	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217992889					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138132933 () rs orientation: forward

Symbol	Name	Function Class
Rr602910	regulatory region 602910	530 bp distal
Rr602911	regulatory region 602911	608 bp distal