rs217953298 SNP Detail

Summary

• ID
  rs217953298
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151876879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTAT GGGGGGGTAT GCGTGCGAGG ATCTCAGTCA TCAGGCTTGC
  TGGCAAGTGT TTTTACCATT GAGCCATCTT ACCAAAGGGC AAGCTACCTG AATACAATGT
  GCCCTACCAT AACAGACACA GGAAAAGGCA GGCATGTTCA AGGAGCATAT ATTCTAGCCA
  G
  TCAGGATCAG ACACAAAACT GAAATAGAAA CACCAACAGG TTGGTCCACA AGCCCTTGCT
  GCCTCAGAGT CTGGCAGTTT CCTTTATACA AGCTCCAAAT AGGAGAGCAA GTTTTAAAAA
  TGCATTTTCA TTGAAGGGCT AAGGAGATGA GTCAGAGGGC AAGAGGTCAT TGTGCACACA
  GATAAGCACT GGAGAAGCCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321028297	CHEV_3_151834206	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217953298					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151876879 () rs orientation: forward

Symbol	Name	Function Class
Gm64603	predicted gene, 64603	within coordinates
Gm64610	predicted gene, 64610	within coordinates
Rr587476	regulatory region 587476	within coordinates
Rr587477	regulatory region 587477	725 bp proximal