rs217797425 SNP Detail

Summary

• ID
  rs217797425
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:111725140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGCCAAT GTGAACAGCA
  GTTGTTGGAC TAGAGAAGAG ACCTTTATAT CTATGGCGTG GCCTCCTCTA AGCTAGCTTG
  TGAAGTGGAA ACTTAAGGGT TCTTTGGAAA GTAATAGATG GTGTTTTGCT GGGGAAAACA
  CCTGAGGGAA CATTTCACTG AAGCAGACAC AGGTGAAAGG ATGTTCTGCC AAAGCAAGCA
  Y
  GTAAAGGACA CATGATGAAG GATTCTTTGC TAACCACATG CATAAATTGG TCAGCCTTAT
  TTTGCATAGT TGAGCTGCAT TTGTCAGGAC TCCATAGAGA GAAATCTCAC CAGAAAACCT
  TCTGGCTGTG TGCTGGTGGC TTCTTGCCAC TTCTGCAGAC TCAGAAGTCT GAGTGGTGTC
  AGCTGAGACA GACACACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321263058	CHEV_4_111540548	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217797425					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:111725140 () rs orientation: forward

Symbol	Name	Function Class
Rr597504	regulatory region 597504	877 bp distal
Rr597505	regulatory region 597505	44 bp proximal