rs217758575 SNP Detail

Summary

• ID
  rs217758575
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87084128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAC CACTCACTCA ATCTAACTGT
  C
  AGCATTTGAC ATTCACCTCT GCAGG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320831260	CHEV_3_86980743	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217758575					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87084128 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13330	CpG island 13330	1784 bp distal
Gm64310	predicted gene, 64310	within coordinates
Rr579457	regulatory region 579457	1584 bp distal
Rr579458	regulatory region 579458	1061 bp distal
Rr579459	regulatory region 579459	975 bp distal