rs217749076 SNP Detail

Summary

• ID
  rs217749076
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151796413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTGGGTG ATGTACACTT
  CACATTGTTC CCGTAAAACG TTAACAGAGT CGGCTTTGCA GAGAGCTGAG AATTTGACTC
  CAAATCCTGT TCAAGTCCTG AATTTGCCAC TAGCTACATA TGTGCCCTTG AGCAAGTGAC
  TTAATTTCCC ACAACCTACT TTTTTAAAAT ATTTAAAAAT GAGGTGAACG TTACTCAAGG
  A
  GTTGCTAAGG ATTACCTGAA GTGGCTGACT AAATACTTGT TGACATTCTT CATTGTCTTA
  GTTAGGGTTT TATGGCTGTG AAGAGACTCC ATGACCAAGG GAAATGTTAT AAAGGAAAAC
  ATTTAATTGG GGCTGGCTGA AAGGTTCAGA GAGTCGGTCC ATTATCAGCA TGGCAGGAGC
  ACGGCAGCAT CCAGGCAGGC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321027982	CHEV_3_151753740	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217749076					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151796413 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13938	CpG island 13938	1727 bp proximal
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	1254 bp distal
Rr587444	regulatory region 587444	1350 bp distal
Rr587445	regulatory region 587445	1703 bp proximal