rs217721897 SNP Detail

Summary

• ID
  rs217721897
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38841043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCCAAGT CCGTGCTGAG
  TTCAGATGTG GGAAAGGGGA GAGAAACCTC TTGCCAGTGT CCTGAGAAGT GAAGCACGAG
  CAAATGTCTG CCCATTCGGA AGAGAGCTGA TGACAGACCA GAGTCCTGAT AACCCTGAAG
  TCCAACTCCG GGAACCAATG AGTTTGTTGG GTGACATACA AAAAGCATGG ACAAGAAGTT
  Y
  TTACAGTTCT CTGACAACTC AAAGGCAGCA TCATTGAAAG CCCAGCATGG GTGATGACAG
  CCACAAAGCT TCAACCCTGG CACTCTCCAC GCAGCTTGTA GCAGGTTAAT GGATGGTTGT
  GGAGTCTCAG CTCAGCAGCA GCCTTTATTG CTTACAAAAT CTTGAGTGGG GAGGGACCTT
  ATGGGTATAT TTATCTACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320723042	CHEV_3_38685816	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217721897					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38841043 () rs orientation: forward

Symbol	Name	Function Class
Rr575703	regulatory region 575703	1942 bp proximal