rs217705469 SNP Detail

Summary

• ID
  rs217705469
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102968704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGTTGTT TTTAGCACAA TGGGAGAGTT
  TGTGAAGCTA ATAGGAAGAT TGCAATGTGG AAAAAACAAG AAAGCAAAAA CTTGGTAAAT
  TCCTCAAGAG ATATTTTATA AAATTAGAGA TAAACTCTAA AAAAAAACAA TGAGAGACAA
  A
  AAGTTAAAGC AATAACTAGG CTTGAAATGT TGTGTTAGTC AGGTAAAGTT ATGGTAGCTC
  ACATCTCTAA TCTTATCCTA TCTTTGGTTA AGGACCATGC ATTTATTACA AAGGCCATTT
  TTTAAATTTC CGAATTTCAG CTCCTGTAAG                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321235888	CHEV_4_102784112	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217705469					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102968704 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnai4	dynein axonemal intermediate chain 4			Intron
				Noncoding-Transcript-Variant
E030030F06Rik	RIKEN cDNA E030030F06 gene			within coordinates
Rr596355	regulatory region 596355			1072 bp proximal