rs217646065 SNP Detail

Summary

• ID
  rs217646065
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTAACTA AGCAATAAAG
  TAATATCGTA TTTGGGGGGC ACATACTGTG TGTGAATCCT TAGGTCACTG ATTCATAAAC
  ACTTCACAGT AAGGAAGCAT CCCCATTTTT ATCTTTAAAC ATTTTTGGTC TGGTTTACTT
  TTTTATTTGT TTTTCCAAAC AGGGTTTCTC TGTGTAACCC TGGCTGTCCT GGAACTTACT
  Y
  TGTAGACCAA GCTGGCCTCG AACTCAAAGA TCTACCTACC TCTTTGCTCT GCCTCCCAAG
  TGCCAGGATT AAAAGTAATG GCATTTTGGC TGGACAGTGG TGGCGCACAA CTTTAATCCC
  AGCACTTGAA AGACAGAGAC AGGCAGAGCT CTGTGATTCA AGACTACATA GCAAGTTCTG
  GGCCAGCCAG GAATACACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337144	CHEV_4_132443096	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217646065					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614492 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	765 bp downstream
Gm70413	predicted gene, 70413	965 bp downstream
Rr601103	regulatory region 601103	1868 bp distal
Rr601104	regulatory region 601104	479 bp proximal
Rr601105	regulatory region 601105	663 bp proximal
Rr601106	regulatory region 601106	773 bp proximal