rs217526268 SNP Detail

Summary

• ID
  rs217526268
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109376592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAATGGCC TGTGTTTATC
  AGTGTTATCA ATTAGGAAGC CAATGCATAC TTGCTTGAGT ATATTTGGCA ATAGGCATAT
  TTGACACTAG GTGAAGATTT TTGCACCAAT GATTTCATTT GACTTCACAA TTTCCCCAGG
  ATCGGCTTAA ATATCTCAAA ATCATATGTT AGAAATGGGC TCAGATAAGC TAAGTAACTT
  T
  CCCAGATCAC TCAAGTATGA AATGTTGAAG TCATTCTTCT AGTGCCCAGT CACAAGATTC
  TAAAACCTGT GTTCTTTTTT TTTTTTTTTT TTTTTTTGTT GATATAACAT TCTACTTCTA
  TGTTAGGCAA AGAGATAAGG GTCTAAGAGG GCTACTGACA AGACCCGGAA TTTGGAGATA
  CTGTTTCCAG ATTCCTAATA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320869322	CHEV_3_109272194	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217526268					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109376592 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	1642 bp distal
Rr583418	regulatory region 583418	1693 bp distal
Rr583419	regulatory region 583419	275 bp proximal
Vav3	vav 3 oncogene	Intron