rs217324042 SNP Detail

Summary

• ID
  rs217324042
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111534887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAAGAAGT CAGTTAgggc caacaaggtg
  actcagtaag taaaagccct tgctaccaag attgaagacc tgaatttgag ccttggtcaa
  ggagaaaact cttccccatg tatttttctc taacatccgc aaatatgctg aggcatctac
  W
  tacacctgca cagacaTaca aacttataca gatacatatg cacatatgca cgcacacaca
  tacacacCAG GGCAATACAC AAAATACAAT ATTTAAAAAA GAGAAGTCCA GCTAACTAAC
  CTAAAACCGT ATTTTACAGT TCTTCAGAGA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321905976	CHEV_6_111507920	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217324042					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111534887 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	1470 bp upstream
Rr636272	regulatory region 636272	1730 bp proximal