rs217250580 SNP Detail

Summary

• ID
  rs217250580
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61333672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCAAAAAA TCTGAACAAT ATTAAATGAA
  ATTCAGTGTT GAAAACAATA TTTATATGCT GTGATTATGT AAAACAAAAC ATTGTGTGTA
  GGAAAATATA ATGTGTAGTT TGAAAGAAGA CATGCCATTT TCTGATGCAT ATAGAGATTA
  W
  TGTGATTTCT ACTGTCAGGA ATATATTATT CAAAATAATA CTGGTTCATG AATATCCAGA
  ATATATAACA GAGGCCTGCT CTCTAAAATC AGAATGAAAA TAATTAGAAA TCTTAGGACT
  CAAGATATCT ACGAGTACAA GATCACAATG                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322228022	CHEV_7_68828810	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217250580					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61333672 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	103 bp downstream
Mir344d-1	microRNA 344d-1	732 bp upstream
Mir344d-2	microRNA 344d-2	1348 bp downstream