rs217244538 SNP Detail

Summary

• ID
  rs217244538
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107601879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGCTGAA CCTATGCCCC
  TGATTTCAAG AAGAGAGAGG CCAGGTGTGG TGGCTTATGC CTATAATCCG AGAACATGGG
  AGACAGAGGC AGGTGGGTCT CTATGAGTTC AAGGTCAGCC TGGTCTGCAG AGTGAGTTCC
  AGGTCAGCCA AGGGTAATAC AGTGAGACTC TGCCTCAAAA AAGGAAGAAG AAAAGAGATG
  R
  GGGAAGAAAG AAGAAAAGAG GAGAGGAGAA AAGAGAAGAG GAGAGGAGGA GGAAAAGGAG
  GAGGAGGAGG AAGAGGAGGA AGAGGAGGAA GAAGAGGAGG AGGGAGGAAA TCATCTATTC
  TGTTTCCAAA ATGGGAGGCT TGGCCTCCAT GTCCCCATGT CTGGAGGTGA TGGAAGGGGA
  TTCAGGGGCA AAGCAAGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250735	CHEV_4_107417287	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217244538					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107601879 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	398 bp downstream
Rr597058	regulatory region 597058	426 bp proximal