rs217225177 SNP Detail

Summary

• ID
  rs217225177
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142148620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAACAC TGGCCTTTCT
  TAACTGTAGG CAGACAGGTA CACAATTTAA CATTTCTGAG AGTTGGAGAG TTTTCAAAAG
  AGATTTATCC AAACAGGAAG ATGTTTCCGT ATCAAAAACA TCATTTGTGA TATAAAGCTA
  ATGACTGTCT TCTTACAGAC CCCAGGACTT GTTCTGTAAC AGTAAGGTTG TGTAGTTACA
  K
  CTATGGGTCA TGGTCCTATT TAAGAAAAAA ACCTTACTGT TGTCTAAGTG ATTTGCATGT
  CTGATTTCCC ACCTTTTCAG AACACACTAA TGTGTGGAGT TCCTTGGGTG ACAGTACTTT
  AAACAGTATA TTTTAGATAT TACACATATT TACACTATAT ATCTTCAGAA TCTGAGAATT
  ATCAGGGAGG GTCTGTGAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321001633	CHEV_3_142105823	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217225177					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142148620 () rs orientation: forward

Symbol	Name	Function Class
Gm64781	predicted gene, 64781	within coordinates
Rr586433	regulatory region 586433	378 bp distal
Rr586434	regulatory region 586434	76 bp proximal
Rr586435	regulatory region 586435	681 bp proximal