rs217211839 SNP Detail

Summary

• ID
  rs217211839
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117231570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCCTGTAT CCTAATATAC AGAAAACCTC TTCCTCTTCT
  TCCTCCTCCT CGTCCTCTTT CTCCTCCACT TCTGCTTCTG CCCTGTTTCT GCTTTTTCTG
  C
  TTCTTCTCCT CCTCTTTCTC CTCCTTCTCT TTCTCCTACT CATCCTTTTC CTCTTCCTCC
  TCCTCTTCTT CCTCCTCTTC CTCCCCCTCT TCCTTCTTC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320899515	CHEV_3_117140839	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217211839					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117231570 () rs orientation: forward

Symbol	Name	Function Class
Rr583844	regulatory region 583844	638 bp proximal
Rr583845	regulatory region 583845	1015 bp proximal