rs217196757 SNP Detail

Summary

• ID
  rs217196757
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86760283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGCTAGCT ACCTTAAATT ATTTTCTATC TTAAAAGGTG
  TACACACACA CACACACTCA CACACACACA CACACACACA CACACACACA CACACACACA
  Y
  ATATAAATGG AGGGGGGAGG AGAGAGGAGA GAGAGAACCT TACCCTGTAG CTCTGCCTGT
  ACCAGAACTC ACTATATGAA CCAGATTGGC CTCACACTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321847233	CHEV_6_86733295	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs217196757					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86760283 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Rr633511	regulatory region 633511	572 bp distal
Rr633512	regulatory region 633512	1485 bp proximal
Tssr57506	transcription start site region 57506	1761 bp upstream
Tssr61859	transcription start site region 61859	221 bp downstream