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rs217175937 SNP Detail
Summary
  • ID
    rs217175937
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr6:118456621 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      AAGACGAAG GACAAAAGTT CCTCAGCTGA
    CAGGCGAGGG CTCTGCCCAT GCGCCTAACG GCCCTCCTTT CTGGACTACG CTTTCCAGAA
    GCCTCCGCGA TGACTCCGTG TGTGATCACG TTATGAAGTT TGGCTCTGAG TACCTCACTG
    W
    TGAGCGCTGC GCTGCTTCCC TAAGGCCTGA TCTTTAAGGG GATGATTGAA CAAGCAATGG
    GCACCCTGCG GAGTTAGACA GAAGGCCGTC AGAGGGTGCG CAGTGTGTAC GGTGGGGTAG
    CTTAAATACT TGAAGTTTAC ATCCAAGGAG                                 
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss321924628 CHEV_6_118429678 CHEVERUD SCREENING_POP f SNP A T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs217175937 SNP A T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr6:118456621 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi17903 CpG island 17903 within coordinates
Rr637483 regulatory region 637483 1339 bp distal
Rr637484 regulatory region 637484 351 bp distal
Rr637485 regulatory region 637485 within coordinates
Rr637486 regulatory region 637486 849 bp proximal
Rr637487 regulatory region 637487 1010 bp proximal
Tssr62662 transcription start site region 62662 342 bp upstream
Zfp9 zinc finger protein 9 mRNA-UTR

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory