rs216978506 SNP Detail

Summary

• ID
  rs216978506
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148218197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTGTAAGT GTGCCGGGAT TTCAGTTCAC
  ATTtctttct ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct
  ctctctctct ctctttctct ctctttctct ctctctttct ctctctctct ctctctctct
  M
  tgtctctatg tctctgtctg tctctctgtc tctgtctctg tctctctgtc tctgtctctg
  tctctctctc tctctctctc tctctctctc tctctctctc tctctctcAG TACATTGAGT
  TAATGGACAG CCTTTTATCT CCACTATCCC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320555348	CHEV_2_148202013	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216978506					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148218197 () rs orientation: forward

Symbol	Name	Function Class
Gm39957	predicted gene, 39957	53 bp downstream
Rr566887	regulatory region 566887	170 bp distal
Rr566888	regulatory region 566888	746 bp distal
Rr566889	regulatory region 566889	365 bp distal