rs216842923 SNP Detail

Summary

• ID
  rs216842923
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114294149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGTCTGG GAAATGGAGA TGTGATAGGA
  CCCCCTTCAG GAAGTGCTCT GGAGAAAACA ACACATACCT TCCTGTTCTC TCCCCCAGCC
  CTCACCCCGG AAGCTCTCAG GAGCCATTCC GCATTCTCCT GTGTGCCTGT CTCTCCATGG
  Y
  GCTTCTCTTT AAAGCGCCCA TATCATCTTG AGACCTCTGT GGCACCATGG CTGTGGTGCA
  GAATGAGACT CTAAGTGGAT ACCAACTGTT TCCAGAAAGG AGATGGAGCA AGAGAGTCTG
  AAGAGAATTT GAGATGTTTG GCTGCGGCCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321274064	CHEV_4_114109557	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216842923					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114294149 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597570	regulatory region 597570			1184 bp distal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant