rs216833061 SNP Detail

Summary

• ID
  rs216833061
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34501383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTTTTAT TTATAGTCTA
  CAATAAAGAG AAGCAAGTTA TATTTATTGA GCAAATTGTG TAATTAAACC AGCTCCCAAG
  GTGTTTTTCA TTTTGGAGCT CTGAATTGAC TCCAAGGAAA GTTAAACAAG AATTATCATG
  TTGAAGCAAA AGCTTTGTTT AAGAATAAGC AAGCATAGGT AGGGGCTGAA GAGCTGGCTT
  Y
  GCAATCCACT GCACTTGTTC CCCTTCCAGA GGACCTGAGT TCGATTCCCA GCAACTACAT
  CAAGTGTCTC CCAACCAGTT CCAGAGGATC TGATGCCTCT TAGGAATCTA TACTTGTGTA
  CATACGCGCA TGTGCACACG CATACACACA GAGACAAAAT TAAAAAGTAA GTATTAAAAA
  GATATGAGAA CGTTGCTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701777	CHEV_3_34346156	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216833061					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34501383 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	193 bp downstream
Gm64638	predicted gene, 64638	624 bp upstream
Rr575134	regulatory region 575134	1296 bp distal
Rr575135	regulatory region 575135	428 bp distal