rs216797479 SNP Detail

Summary

• ID
  rs216797479
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34502807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCTTAAG TAGCATAGTC
  CTCATCAAAC CACTGCAACT TACTTGCAGA CAAATTCTAT CCTCCTTTAG TCTGTTTTCC
  TGCTATGACT ACAATAAACT CCCACAATTT AGTATCATAA AAAACAAAAC AAAACTAAGC
  CACAGTGGTG TATGTCTGTG GTCCTACTCC AGAAGAGACT GAGACAAGAC AATCACTGGA
  Y
  AGCAGCTATT TGAGATCAGC CTGGGTAGCA GATCGAGACC TGTCTCAAAA CTAGCAAAAC
  CAAACCAAGA AACCATCCTA AATTATCATC CTGTATTATC TTAAAGTTCA GAATCAGAGA
  TCTCTGCAAA GTTCTGCTGG GCCATTTTTC CTCTGGACAT TCTTGGGGGA TCTTCTCCTT
  TCATCTTCTC AGACCCCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701794	CHEV_3_34347580	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216797479					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34502807 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	within coordinates
Rr575135	regulatory region 575135	1852 bp distal