rs216773304 SNP Detail

Summary

• ID
  rs216773304
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132245255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCAATTG CAGTTCCAGA
  GAGTTCAATG TCTTCTTCCA GCCGCCATGG GTACCAGGCA TGCAAGTCAT GCATAGGCCT
  ACATACATGC AAGACACACA CACACATCGG AAAACTAATT TAAGTAAAAC CAAGAAGTGC
  ACTTTGAGGC CAGACATTTG GGGGTAGGGA GTAAGATGAG GGCTGGGGCG TGAGAGAGCT
  Y
  GTATGCATGT GTGTTCTCAT GTGTGTCAAG GCACACCTGT GGAAGCCCGA AGGCACTGTG
  GTGGGAGTCA GTTTTCTCCT TCTACCATTT GATACTGGGG TGCAATTCAG GTCCTTATGG
  GGTTGGCAAG TGCCCTTAAG CACTGAGTCA TCTCGCCCAC CCCCCTTTCT TGTGTTGGGG
  ACCAAGCCCT GGGCCTTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333998	CHEV_4_132073859	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216773304					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132245255 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
n-TAagc8	nuclear encoded tRNA alanine 8 (anticodon AGC)	1865 bp downstream
Rr377207	regulatory region 377207	1629 bp downstream
Rr600998	regulatory region 600998	1916 bp distal
Rr600999	regulatory region 600999	within coordinates