rs216765033 SNP Detail

Summary

• ID
  rs216765033
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120871851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCAACCA TGAGGGTGCA
  ACGTTTTGAC TACGCTTATG CACCAGAAAC TATATTAGAT TCTCATAAAT TAGATCAGTG
  TTTTTCTGAG CTTAGGAGCC TGTGTTCCAG CAGGGGGAGA CAGACACTTC TAGGTGCCTG
  AAAGAGCTTG TCAGTCAGTC TGCCCTTGAG ATAGGTGTGG AGTGGATGGA TTAGGTGATT
  R
  GTTAGGATGG ATTTCCTCAT GAGTAGGCCC TAGCTAGCTG GTCGTGGTGG GAGGAGGTGG
  AATAGCTCAT GCAGAGCTGC TAACACAGAA AGCAGGTGGA AGTCCAGGAT GCACGTGGGT
  TTGGTATTTA TCCTCAGAGC AGTGGGAGAC CATCAAACCA CACTCAAAGC AAGCATCATC
  AAGTCATATT TGCATTTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CZECHII/EiJ	JF1/MsJ	LG/J	MOLF/EiJ	PWK/PhJ	SPRET/EiJ
ss355459702	MGP_WTSI_2_120867106	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CZECHII/EiJ	JF1/MsJ	LG/J	MOLF/EiJ	PWK/PhJ	SPRET/EiJ
rs216765033					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss355459702	MGP_WTSI_2_120867106	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120871851 () rs orientation: forward

Symbol	Name	Function Class
Rr563766	regulatory region 563766	1765 bp distal
Rr563767	regulatory region 563767	within coordinates
Rr563768	regulatory region 563768	77 bp distal