rs216712032 SNP Detail

Summary

• ID
  rs216712032
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54504534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACACCTTT AATCCCAGCA
  CTTGGGAAGG GTGAGGTCAA TCTCTCTACA TAGTGAGTTC AAGACATCGA AGGCTTTACA
  GGGAGACCCT GCCTGGAAAC AAACAACAAG CAAGCAAACC CAACACCACA TTTCCAGAGA
  GGATTAGCTA AAGTGGTATC TTAGTTAGAG TCACTACTGC TGTGAAGAAA CACCACGACC
  W
  CAGCAACCTG GGAAGGAAAG GGTTTATCTG GCTTATGCTT CAATCACTGT TAATCATCAA
  AGGAAGTCAG AACAGGAACT CAGGCAGGGC AGGATCCTGG AGGCAGGAGC TGATGCAGAA
  GCCATGGAGG GGTGCTGCTT ACTGGCTTCC TCCTCATGCC TTGCTTAGCC TGCTTTCTTA
  TAGAACCCAG GACCACCAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320772133	CHEV_3_54401035	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216712032					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54504534 () rs orientation: forward

Symbol	Name	Function Class
Gm40050	predicted gene, 40050	within coordinates
Rr576818	regulatory region 576818	779 bp proximal